Tag: critical thinking

  • Daily Read: Critical Medicine

    Daily Read: Critical Medicine

    In this article from Vox, Julia Belluz uses the example of medical research to highlight the problems with mainstream media reporting on science. The article points out that reporters have a different idea of what is newsworthy than scientific researchers do, and that is reflected in the way medical “breakthroughs” are reported. Scientists write their reports and articles for a very specialized audience, while reporters must present scientific findings in ways that are accessible to the public. Furthermore, reporters are looking for a hook in their reporting – something that will get eyeballs on their stories. This means that there is often a profound disconnect between the actual findings of scientific research, and the way that research is reported to the general public. The upshot, according to Belluz, is that the general public needs to take reporting on medical studies with a grain of salt because many, if not most, of the most apparently breathtaking findings turn out to be undermined or disproven by further research. This is also true of the seemingly endless stream of reports on diet, exercise, supplements, etc. I can’t stress enough that revisions and refinements of existing research are actually the biggest strengths of science; yet, when the media reports that previously promising treatments or techniques turn out not to work, the general public loses faith in the scientific community. I empathize with Velluz’s rumination on whether it’s a good idea for these studies to even be reported: “I often wonder whether there is any value in reporting very early research. Journals now publish their findings, and the public seizes on them, but this wasn’t always the case: journals were meant for peer-to-peer discussion, not mass consumption.” She is right that early reporting is harmful for the false hope it can give people and for the damage it does to people’s faith in science.

    This is why you shouldn’t believe that exciting new medical study

  • Daily Reads: Pest Control

    Daily Reads: Pest Control

    Today’s article is a must read because it is reporting on an issue that has become divisive in the public eye. A new review of the research on glyphosate, the active ingredient in the weed killer Roundup, shows that it is probably a human carcinogen. As Dan Charles from NPR’s The Salt points out, while this news sounds bad, the truth is really much more nuanced. Yet, as expected, this news is already being trumpeted by those opposed to Monsanto, the company that manufactures Roundup. Monsanto also creates and sells seeds for the genetically modified (GMO) crops that are resistant to glyphosate. To those opposed to the use of GMOs, Monsanto is the devil. So now, there is a review that seems, on the surface, to prove that both glyphosate and by extension, GMOs, are unsafe for humans. Critically, this is not actually what the review concludes. This is a perfect example of how selective reporting on scientific research can confuse and mislead the public. This is incredibly important, because both sides of a debate can leverage these reports to bolster their side, when the truth is usually somewhere in between. I’ll leave it to you to read the article, but here are some of the most important takeaways:

    “…the IARC is saying that glyphosate probably could cause cancer in humans, but not that it probably does.”  “… society often chooses simply to accept certain hazards. Among the other things that the IARC says probably cause cancer are burning wood in home fireplaces, disruption of circadian rhythms by working overnight shifts and working as a hairdresser.” What this means is that the dose makes the poison: yes, glyphosate causes changes in cellular DNA that could lead to cancer, but the report does not say under what circumstances and at what dose. This is a very important area for more research, because there are countless substances in our daily environments that are technically carcinogens, but that you’d have to be exposed to in huge quantities to actually be put at risk.

    “…studies of human health records did not turn up convincing evidence of glyphosate’s cancer-causing potential. A long-running study of farm workers, for instance, did not show higher rates of cancer among those exposed to the chemical.” This conclusion from the report will definitely not be showing up in the responses from those organizations that are anti-GMO and anti-Monsanto.

    “…Glyphosate residues on food, however, are not of great concern. The chemical is used in the early stages of growing crops like soybeans, corn, and canola. Those crops, if they even reach human consumers at all, are heavily processed first, destroying any glyphosate residues.” Again, this fact is not likely to be highlighted by those who are motivated to cherry-pick only those parts of the report that fit their beliefs.

    All this said, I also want to point out that I am disappointed (although far from surprised) in Monsanto’s response that the report is biased and constitutes “junk science.” The research cited in the report does show a probable carcinogenic effect that needs more study, and it’s disingenuous for Monsanto to dismiss it simply as bad science. Monsanto has an agenda too, so they are just as likely to cherry-pick as the anti-GMO crowd. True skepticism and critical thinking means taking account of all the data; but I realize that’s a lot to ask when it comes to these controversial issues. If you are anti-GMO or if this report scares you, please read the article and realize that this is not the final word, and that frightening buzzwords like “carcinogen” and “cancer” should not derail your responsibility to think critically.

    A Top Weedkiller Could Cause Cancer. Should We Be Scared?

  • Daily Reads: Color Blind

    Daily Reads: Color Blind

    This Daily Read relates directly to my last post about race, but focuses more on the social dimensions of racial categories and how people are perceived. Jenée Desmond-Harris of Vox reviews a study that shows that white people perceive lighter-skinned people of color to be more successful and intelligent than their darker-skinned peers. Even with everything else being equal – education, achievement, social class, etc. – darker-skinned people were still categorized as less intelligent and capable of success. This is exactly what I was talking about in my last post when I explained ascribed status. This is highly problematic for the way it categorizes people based on purely arbitrary physical characteristics. As the article says, “It’s reasonable to conclude that this type of thinking  — whether it’s conscious or the result of implicit bias — could taint decisions about everything from hiring and promotions, awards and internships, to mentorship and all of the other judgments that determine the trajectory of a person’s life.” I think it’s important to be aware of these unconscious biases so we can try to bring them into the realm of consciousness and hopefully be less likely to act on them.

    Study: lighter-skinned black and Hispanic people look smarter to white people

  • (R)anthropology Class: The Myth of Race

    (R)anthropology Class: The Myth of Race

    I have decided to start a new series that I am calling (R)anthropology Class. I draw on my anthropological training in so many different ways, and I know that this training is what has helped me view the world in a critical and objective way. Because I know that most people have never taken an anthropology class – or if they have, it was long ago – I have decided to focus some of my posts on some of the most basic, but important, anthropological concepts. These usually occur to me when I am in the midst of trying to make sense of some new idea or trying to explain my point of view to others. That was the case recently when I was trying to explain to someone why DNA ancestry tests can be extremely misleading for people who don’t know much, if anything, about population genetics. So with this inaugural (R)anthropology Class rant, I will sketch in the basics of why a commercial DNA ancestry test cannot tell you your race.

    There is no question that race is a real thing. All we have to do is look at the people around us to know that this is true: different skin colors, hair textures, facial characteristics, even height and body type show us that people are different from one another. Yet, from a genetic standpoint, race is not a real thing at all. Instead, what we call race is a cultural construct that reflects the human need to seek and identify patterns in our surroundings that help us to understand and categorize our world. Race, in other words, is cultural rather than biological.

    How can I say such a thing? All you have to do is look at someone to know what race they are – right? Dark skin = African. Epicanthic folds in the eyelids = Asian. Blue eyes = European.** And if a person happens to have parents of two different races, then that person will show a blend of different racial characteristics from his or her parents. Or if a person is descended from several different races, they will still show some traits that help you identify those ancestral races – or so we like to think. But ask any person who identifies as mixed race and you will find that their lives are full of mistaken assumptions about what their race is – and concomitantly full of different types of treatment depending on what people might unconsciously assume their race to be. Again, this is all entirely based on cultural categories, and is part of what anthropologists call ascribed status. An ascribed status is a status that a person can’t do anything to change – such as age, gender, or in this example, race. But people make mistakes in the statuses they ascribe to others all the time. When I teach my students about this in my lecture on race, I ask them if they have ever been mistaken for a race other than the one they assign to themselves. The hands of my students of color always, without fail, shoot into the air. And, sometimes, my students who look white raise their hands, too – and they surprise their classmates by identifying as having African-American, non-white Hispanic or Latino, Asian, or some other non-white racial ancestry.*** I have Filipino students tell me they are mistaken for Latino or Middle Eastern; I have Asian students describe how they are always ascribed to the Japanese or Chinese category when they are actually Korean or Vietnamese or Thai; I have students with roots in countries throughout South America tell me that nobody seems to know that there are countries other than Mexico south of the US border.

    Here’s the deal, biologically: humans are 99.999% genetically identical. That means that only one out of every 1000 DNA nucleotides is different between any two individual humans. But that tiny .001% difference is reflected in some very recent, visible physical differences between human populations. Human physical traits – called phenotypes – have evolved based on adaptation to specific geographic regions and the pressures of natural selection within those regions. So, natural selection results in phenotypic variation in traits like skin color. Skin color has evolved in response to sun exposure and vitamin D metabolism – the further north a population lives, the less sun they get, which means the less essential vitamin D they are able to metabolize. So by virtue of natural selection, lighter skin color that allows for more efficient vitamin D absorption has evolved in human populations that live in low-sunlight areas, whereas the melanin that causes darker skin has remained abundant in populations closer to the equator. Hence, populations in equatorial Africa are very dark, whereas populations in far northern Europe are very light. This same sort of natural selection has operated on other genes as well, resulting in a wide variety of phenotypes throughout the world. And naturally, those phenotypes remain clustered within the populations where they evolved, which makes it simple for pattern-seeking humans to use those phenotypes to categorize people into the physical types that we have labelled “races.”

    Another important point about phenotypic variation is that it is continuous. In other words, there is no sharp, clear dividing line between different types. If you were to line up every person in the world in order from palest skin to darkest, where would you draw the line between dark and light? Or even if you came up with more categories – pale white, medium white, light tan, dark tan, light brown, etc. – where would you put those lines? It’s like trying to pinpoint the exact spot in a rainbow where the color turns from red to orange – it can’t be done! And yet the rainbow continuously shifts in colors until you go all the way from red at the beginning to violet at the end. Continuous human phenotypes operate in exactly the same fashion. Consider, also, that if you were to draw skin color lines in the human rainbow, you would find individuals from several different races or ethnicities within a single skin color category – Australian aborigines, east Indians, and sub-Sarahan Africans could all be found within one dark-skinned group! A bottom-line way of putting it is this: there is no single trait that can be found in one so-called racial group that does not also exist in some other so-called racial group. You can find dark skin in several groups, epicanthic folds in several groups, and blue eyes in several groups. Race as biology is a cultural fiction.

    So, what does this have to do with DNA ancestry tests? I have serious misgivings about the way these tests are marketed because they trade on people’s lack of knowledge about the biological fiction of race and give them the impression that they are finding out about their own supposed racial ancestry. In fact, if not strictly unethical, I think that the companies who peddle these tests are at best taking advantage of people’s forgivable ignorance about the complexity of genetics. Now, I’m not saying that people can’t or even shouldn’t research their ancestry if it interests them; it would be fascinating to find out that what you thought was your completely European ancestry actually had, say, a branch from a part of Asia. But when I say that, I’m talking about genealogical, not genetic, ancestry research. Genetic ancestry research cannot tell you that you have an Asian ancestor; it can only tell you if you have genetic markers that are associated with particular broadly-defined genetic populations.

    DNA ancestry tests use what are called haplogroups to assess genetic ancestry. A haplogroup is a group of similar genes – called haplotypes – that reflect single nucleotide polymorphism (SNP) mutations. What is important about SNP haplogroups is that they can be used to broadly delineate genetic populations. This goes back to the discussion above about phenotypic traits that arise in particular geographic regions in response to specific selective pressures. These haplogroups can be traced in two ways: either on the Y chromosome, which is only present in males; or in mitochondrial DNA (mtDNA), which is a separate set of DNA from the nuclear DNA that codes for our particular physical traits. Mitochondrial DNA is only found in our cells’ mitochondria, and we get it only from our mothers. Both Y haplogroups and mtDNA haplogroups are very stable and have a very slow rate of mutation, so they remain relatively unchanged for long periods of time. This means that we can compare these haplogroups in people today to ancient haplogroups associated with particular regions and populations. Commercial DNA ancestry tests look at an individual’s haplogroups and compare the results to known population haplogroups.* These results are used to complete a statistical analysis of a person’s possible ancestry. So, if you have a haplogroup associated with Asia, your DNA test results will say so.

    Here’s where things get problematic. Most people don’t know all the things about DNA and populations genetics that I am writing about in this post, so when they see a result of, say, 12% African, they think it means they are “part Black.” I can’t stress enough that this is not what these results mean. What it means is that the person has a haplogroup that is associated with known ancestral African genetic populations. It’s a statistical correlation, not an absolute. And things get even trickier when you realize that Y and mtDNA haplogroups can be incredibly diverse even within a seemingly homogenous regional population. In fact, population geneticists know that there is more variation within the groups we call races than there is between the groups we call races. I am just as likely to share identical mtDNA ancestry with someone from Asia – where I have no ancestors that I know of – as I am to share it with someone from Sweden, where I know my immediate ancestors came from. Don’t get me wrong – I’m not saying we can’t learn anything from comparing haplotypes – we can. But it is completely wrong to say that you are “part Black” or “part Native American” or “part Asian” based on DNA ancestry testing. All it tells you is that you have a haplogroup that could have entered your genetic lineage thousands of years ago that derived from that part of the world.

    This has been a long post, and it is a complicated subject. I have no doubt that some people will read this and misunderstand. Let me part with this: if you want to get a DNA ancestry test, feel free. Just don’t make the mistake of thinking it is telling you anything about your race – it’s not. And finally, never forget that even though what we think of as race is not biologically real, it is still a complex, vital, and unmistakable social reality. We continue to treat people differently on the basis of it; and some people even still insist that the behaviors we associate with race and ethnicity have a genetic basis. We are not that far from the days when the civil rights of African Americans, Native Americans, and other people of color were denied because of the belief that they were genetically inferior to white people. In that sense, race is historically, culturally, and painfully real.

    *Since I wrote this post in February 2015, the technology used by commercial testing companies has expanded to include autosomal DNA haplogroups. Autosomal DNA is the DNA found in the nucleus of all your body’s cells. You get 50% of your autosomal DNA from your mother and 50% from your father. Using autosomal DNA allows a DNA test to see your results from both your maternal and paternal lineages, but it does not automatically mean you will get a more accurate picture; because of the process of meiosis, which is how sperm and eggs are made, each sperm or egg only has half of a person’s DNA. That means that every sperm and egg is essentially unique, and does not contain every possible haplogroup that is part of a person’s autosomal DNA. So, the sperm and egg that made YOU does not have every one of your parents’ haplogroups; and if you have kids, they won’t have all of your haplogroups, either. This is why even full siblings often will not have the exact same results, because each person carries a unique combination of DNA. (Edited January 27, 2018)

    **A comment from a reader pointed out that there are problems with the use of the term Caucasian – problems, embarrassingly, that I had never considered, but which seem obvious to me after a little bit of reading and reflection. I have edited the post to replace the word Caucasian with European or white. This article by Yolanda Moses provides a compelling and succinct explanation for why we need to stop using the term. (Edited February 13, 2018)

    ***A comment from a reader pointed out a lack of clarity here, given that there is a subset of Latino and Hispanic that falls within the white European racial category. (Edited January 8, 2019)

  • Daily Reads: No Comment

    Daily Reads: No Comment

    Today’s Daily Read isn’t the most scintillating article I’ve ever read, but the information it contains is revealing and important, so I believe it is worth the quick read. Cathleen O’Grady of Arstechnica reports on two studies that looked at the influence of online comments on the effectiveness of public service announcements (PSAs). The study created mock PSAs on the safety and efficacy of vaccines – one pro-vaccine and one anti-vaccine – and paired them with anonymous comments that supported or refuted the message of the PSAs. The researchers made sure to attribute each PSA to health organizations that were perceived as credible by the study participants. In the first study, participants were more likely to have their opinions swayed by the PSA if they thought the source was credible; however, if they found the commenters to be credible they were less likely to be swayed by the PSA. In the second study, the participants were provided with general information about the commenters – e.g. one commenter was identified within the comment as a college student, another as a health care lobbyist, and a third as a medical doctor specializing in disease and vaccines. In this study, the participants were more swayed by the commenters they perceived as credible – in this case, the self-identified doctor – than they were by the PSA. This occurred regardless of whether the doctor agreed or disagreed with the PSA. As the article notes, this research is not definitive, but it points out an important weakness in how people perceive information they receive from anonymous comments – which is, how can we know that a self-identified commenter truly is the expert he or she claims to be? I think this is hugely important, and very troubling. It’s one thing to trust the credibility of an anonymous restaurant review on Yelp; it’s quite another to trust anonymous opinions on critical health and social issues.

    Don’t read the comments—they can make you mistrust real experts

  • Daily Reads: Measles Mania

    Daily Reads: Measles Mania

    Today’s Daily Read relates to the post I wrote a few days ago about how difficult it can be to convince people to accept ideas that go against their already strongly-held beliefs. I actually have two articles to share today. The first, from the Washington Post, made my eyeballs pulse with rage when I read it: it talks about a medical doctor in Arizona who has catapulted into the media spotlight because he supports anti-vaxxers. Jack Wolfson is a cardiologist who now practices holistic medicine. He supports his anti-vaccination stance with thoroughly unscientific and debunked ideas about “chemicals” in vaccines being harmful (forgetting or ignoring the fact that there are chemicals in everything); arguing that people should get viruses because they are natural (clearly he has never heard of the naturalistic fallacy – just because it’s natural doesn’t mean it’s good for you); and proposing that following a paleolithic diet provides enough immune protection to make vaccines unnecessary (not considering that paleolithic humans had infant mortality rates of over 50 percent, life spans of around 40 years, and suffered from boom and bust food cycles that could leave them malnourished, vitamin and mineral deficient, and prone to disease; not to mention that he hasn’t considered the fact that “paleo” diets were incredibly diverse depending on which population of ancient humans you are following. I, for one, wonder how many modern followers of paleo would go the Inuit route and eat almost nothing but raw fish and seal blubber). Of course, Wolfson has been embraced by anti-vaxxers as a champion, especially in light of the ongoing measles outbreak.

    The second article is from last year and comes from Chris Mooney of Mother Jones. I linked to it in my post from a few days ago too, but I want to bring it up again here because it discusses a study that shows how presenting anti-vaxxers with information that refutes their views causes them to embrace those views even more fervently. I include it because even though people like Wolfson make me want to pelt them with facts and studies, I have to remind myself that the backfire effect, as detailed in Mooney’s article, makes this approach futile. Fortunately there is some new research that is looking into how to approach these issues in a way that makes people receptive to new information, but so far, it seems that most people are still yelling past each other and not changing any minds at all.

    Amid measles outbreak, anti-vaccine doctor revels in his notoriety

    Study: You Can’t Change an Anti-Vaxxer’s Mind